Miyakogusa Predicted Gene

Lj5g3v0308800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ICD8_MEDTR 1061 74.2 83.3 (tr|G7ICD8) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g018350 PE=4 SV=1
TAIR_pep AT1G27750.1 281 41.3 56.3 | Symbols: | nucleic acid binding | chr1:9657425-9661750 FORWARD LENGTH=1075
Medicago Medtr1g018350.1 1079 74.3 83.4 | SPOC domain protein | HC | chr1:5269271-5256008 | 20130731
Soybean Glyma17g35410.1 935 69.3 75.5  
LJGI gnl|LJGI|FS357196 1170 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0308800.1 length: 947 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 0.00031 235-298
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 6.4e-07 231-292
IPR012921 Spen paralogue and orthologue SPOC, C-terminal
HMMPfam PF07744 SPOC 1.8e-12 802-914
IPR016194 SPOC like C-terminal domain
Gene3D G3DSA:2.40.290.10 no description 0.00015 874-916
no_ID  
HMMPfam PF13893 RRM_5 8.3e-05 254-292
Seg seg seg NA 3-14
75-85
721-784
superfamily SSF54928 RNA-binding 2.1e-09 221-301
Wolf-PSORT
Lj5g3v0308800.1	nucl 10, chlo 2, vacu 1, chlo_mito 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0308800.1