Miyakogusa Predicted Gene

Lj5g3v0308670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B6DVV6_GLYSO 204 50.8 54.8 (tr|B6DVV6) Putative Cys2-His2 type zinc finger protein OS=Glycine soja PE=4 SV=1
TAIR_pep AT1G27730.1 131 37.9 45.1 | Symbols: STZ, ZAT10 | salt tolerance zinc finger | chr1:9648302-9648985 REVERSE LENGTH=227
Medicago Medtr1g018420.1 202 50.0 56.1 | C2H2-type zinc finger protein | HC | chr1:5294238-5295310 | 20130731
Soybean Glyma17g35430.1 204 50.6 53.8  
LJGI gnl|LJGI|TC72860 1419 99.9 99.9 homologue to UniRef100_P93166 Cluster: SCOF-1; n=1; Glycine max|Rep: SCOF-1 - Glycine max (Soybean), partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0308670.1 length: 239 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 86-106
144-164
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.411 84-111
142-164
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 0.19 84-106
142-164
no_ID  
HMMPanther PTHR26374 FAMILY 2.2e-39 44-224
HMMPanther PTHR26374:SF121SUBFAMILY NOT 2.2e-39 44-224
HMMPfam PF13912 zf-C2H2_6 7.7e-10 84-108
142-166
Seg seg seg NA 33-47
61-76
118-139
166-191
superfamily SSF57667 C2H2 1.9e-10 82-164
Wolf-PSORT
Lj5g3v0308670.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0308670.1