Miyakogusa Predicted Gene

Lj5g3v0308500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T0W4_LOTJA 248 100.0 100.0 (tr|I3T0W4) 40S ribosomal protein S24 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G28060.1 228 86.1 97.5 | Symbols: | Ribosomal protein S24e family protein | chr5:10069791-10070792 REVERSE LENGTH=133
Medicago Medtr1g081410.1 243 95.1 100.0 | 40S ribosomal protein S24-2 | HC | chr1:36221581-36224014 | 20130731
Soybean Glyma03g40530.1 244 95.9 100.0  
LJGI gnl|LJGI|TC58978 821 100.0 100.0 homologue to UniRef100_A5BH65 Cluster: 40S ribosomal protein S24; n=1; Vitis vinifera|Rep: 40S ribosomal protein S24 - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0308500.1 length: 137 aa.
IPR001976 Ribosomal protein S24e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD006052 Q8LC83_ARATH_Q8LC83; 3e-33 14-86
HMMPanther PTHR10496 40S 1.9e-86 3-135
HMMPfam PF01282 Ribosomal_S24e 1.3e-36 24-106
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.2e-47 6-108
IPR012678 Ribosomal protein L23/L15e core domain
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
superfamily SSF54189 Ribosomal 5.5e-38 6-108
IPR018098 Ribosomal S24e conserved site
PatternScan PS00529 RIBOSOMAL_S24E NA 66-88
no_ID  
Seg seg seg NA 123-137
Wolf-PSORT
Lj5g3v0308500.1	nucl 5, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0308500.1