Miyakogusa Predicted Gene
- Lj5g3v0290440.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M5L4_SOYBN |
130 |
87.5 |
91.7 |
(tr|K7M5L4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G25000.1 |
96.3 |
62.5 |
76.4 |
| Symbols: ATAMY1, AMY1 | alpha-amylase-like | chr4:12852109-12853825 REVERSE LENGTH=423 |
| Medicago |
Medtr1g019480.1 |
122 |
84.9 |
84.9 |
| alpha amylase domain protein | HC | chr1:5884776-5886764 | 20130731 |
| Soybean |
Glyma14g09090.1 |
119 |
88.1 |
91.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0290440.1 |
length: 73 aa. |
| IPR012850 |
Alpha-amylase, C-terminal beta-sheet |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004556 |
alpha-amylase activity |
|
|
| Molecular Function |
GO:0005509 |
calcium ion binding |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF07821 |
Alpha-amyl_C2 |
7e-24 |
12-72 |
| HMMSmart |
SM00810 |
Alpha-amylase |
1.6e-33 |
12-72 |
| IPR013780 |
Glycosyl hydrolase, family 13, all-beta |
| Gene3D |
G3DSA:2.60.40.1180 |
no description |
5.4e-25 |
16-73 |
| no_ID |
|
| superfamily |
SSF51011 |
Glycosyl |
2.7e-21 |
16-72 |
- Wolf-PSORT
Lj5g3v0290440.1 cyto_nucl 7.33333, cyto 7, nucl 3.5, cysk_nucl 2.83333, chlo 1, mito 1, extr 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0290440.1 |
|