Miyakogusa Predicted Gene

Lj5g3v0279370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MX16_SOYBN 646 57.8 70.0 (tr|I1MX16) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G16830.1 337 37.1 55.5 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:5760793-5762619 FORWARD LENGTH=608
Medicago Medtr7g025610.1 514 50.1 63.6 | PPR containing plant-like protein, putative | HC | chr7:8534854-8532764 | 20130731
Soybean Glyma17g33560.1 645 59.2 71.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0279370.1 length: 644 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.34 215-244
HMMPfam PF12854 PPR_1 4.2e-11 278-310
HMMPfam PF13041 PPR_2 9.8e-08 316-364
384-432
491-537
HMMTigr TIGR00756 PPR: 2e-05 250-283
284-317
319-352
389-420
498-526
ProfileScan PS51375 PPR 5.503 110-144
145-179
212-246
247-281
282-316
317-351
385-419
420-456
490-524
525-559
560-594
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.8e-10 254-541
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-83 57-594
HMMPanther PTHR24015:SF0 SUBFAMILY 3.1e-83 57-594
Seg seg seg NA 10-23
190-201
626-643
Wolf-PSORT
Lj5g3v0279370.1	chlo 5, mito 4, nucl 2.5, cysk_nucl 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0279370.1