Miyakogusa Predicted Gene
- Lj5g3v0255610.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
D7KT92_ARALL |
184 |
60.3 |
73.7 |
(tr|D7KT92) EMB1793 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476757 PE=4 SV=1 |
| TAIR_pep |
AT1G76060.1 |
178 |
59.5 |
72.5 |
| Symbols: EMB1793 | LYR family of Fe/S cluster biogenesis protein | chr1:28543367-28543840 REVERSE LENGTH=157 |
| Medicago |
Medtr1g026078.2 |
179 |
63.6 |
76.2 |
| complex 1 protein, LYR family protein | HC | chr1:8413910-8410912 | 20130731 |
| Soybean |
Glyma17g38060.1 |
172 |
59.4 |
76.2 |
|
| LJGI |
gnl|LJGI|TC66536 |
896 |
98.9 |
98.9 |
similar to UniRef100_A7NVN5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0255610.1 |
length: 156 aa. |
| IPR008011 |
Complex 1 LYR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05347 |
Complex1_LYR |
9.2e-10 |
70-128 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
44-55 |
- Wolf-PSORT
Lj5g3v0255610.1 nucl 5.5, cyto_nucl 5.5, cyto 4.5, plas 2, chlo 1, mito 1, chlo_mito 1, golg_plas 1, cysk_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0255610.1 |
|