Miyakogusa Predicted Gene

Lj5g3v0240200.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MC27_SOYBN 1582 84.8 89.3 (tr|I1MC27) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT1G27940.1 1290 68.0 81.2 | Symbols: PGP13 | P-glycoprotein 13 | chr1:9733597-9738129 REVERSE LENGTH=1245
Medicago Medtr1g025560.1 1417 77.2 86.0 | ABC transporter B family protein | HC | chr1:8180282-8185564 | 20130731
Soybean Glyma14g40280.1 1564 84.2 88.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0240200.2 length: 921 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 4.5e-47 386-655
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.4e-24 112-237
746-871
ProfileScan PS50893 ABC_TRANSPORTER_2 21.109 71-306
704-921
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 4.4e-18 97-283
731-917
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 4.4e-58 338-861
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 209-223
843-857
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 42.337 382-669
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-67 71-292
683-921
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 2.7e-46 370-682
Gene3D G3DSA:3.40.50.300 no description 5.8e-80 70-300
703-920
HMMPanther PTHR24221 FAMILY 0 1-921
Seg seg seg NA 32-49
305-328
Wolf-PSORT
Lj5g3v0240200.2	chlo 8, vacu 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0240200.2