Miyakogusa Predicted Gene

Lj5g3v0238160.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MC29_SOYBN 1332 66.9 76.4 (tr|I1MC29) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G24200.1 223 35.4 49.6 | Symbols: | Transcription elongation factor (TFIIS) family protein | chr4:12556927-12559929 REVERSE LENGTH=1000
Medicago Medtr1g025500.1 1269 64.8 73.6 | transcription elongation factor (TFIIS) family protein, putative | HC | chr1:8163279-8157128 | 20130731
Soybean Glyma17g37840.1 1291 65.4 74.9  
LJGI gnl|LJGI|TC63657 797 100.0 100.0 similar to UniRef100_A7P8A2 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0238160.2 length: 1074 aa.
IPR017923 Transcription factor IIS, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
Gene3D G3DSA:1.20.930.10 no description 1.1e-05 61-148
ProfileScan PS51319 TFIIS_N 10.230 73-153
superfamily SSF47676 Conserved 2e-08 59-167
no_ID  
Coil coil coiled-coil NA 476-497
541-562
Seg seg seg NA 542-554
814-827
934-943
1042-1046
Wolf-PSORT
Lj5g3v0238160.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0238160.2