Miyakogusa Predicted Gene
- Lj5g3v0228130.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7I7P5_MEDTR |
330 |
69.4 |
81.0 |
(tr|G7I7P5) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g025340 PE=4 SV=1 |
| TAIR_pep |
AT1G30755.1 |
182 |
45.0 |
60.5 |
| Symbols: | Protein of unknown function (DUF668) | chr1:10905991-10908773 REVERSE LENGTH=615 |
| Medicago |
Medtr1g025340.1 |
330 |
69.4 |
81.0 |
| DUF668 family protein | HC | chr1:8086924-8092881 | 20130731 |
| Soybean |
Glyma14g40360.2 |
295 |
66.8 |
76.2 |
|
| LJGI |
gnl|LJGI|BW598763 |
444 |
100.0 |
100.0 |
similar to UniRef100_A1KA54 Cluster: Two component system transcriptional regulatory protein; n=1; Azoarcus sp. BH72|Rep: Two component system transcriptional regulatory protein - Azoarcus sp. (strain BH72), partial (7%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0228130.1 |
length: 252 aa. |
| IPR021864 |
Protein of unknown function DUF3475 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF11961 |
DUF3475 |
8.4e-18 |
124-180 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
141-162 |
| HMMPanther |
PTHR31730 |
FAMILY |
3.3e-40 |
59-242 |
| HMMPanther |
PTHR31730:SF0 |
SUBFAMILY |
3.3e-40 |
59-242 |
- Wolf-PSORT
Lj5g3v0228130.1 nucl 9, extr 2, chlo 1, cyto 1, mito 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0228130.1 |
|