| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1KJW5_SOYBN | 382 | 63.7 | 71.9 | (tr|I1KJW5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT5G35330.3 | 253 | 64.2 | 80.4 | | Symbols: MBD02 | methyl-CPG-binding domain protein 02 | chr5:13523725-13525270 REVERSE LENGTH=272 |
| Medicago | Medtr6g093020.4 | 358 | 59.2 | 68.4 | | methyl-CpG-binding domain protein | HC | chr6:35077456-35081124 | 20130731 |
| Soybean | Glyma07g15620.1 | 382 | 63.7 | 71.9 | |
| LJGI | gnl|LJGI|TC72771 | 846 | 99.5 | 99.5 | homologue to UniRef100_A7R4F2 Cluster: Chromosome undetermined scaffold_675, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_675, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%) |
| Lj5g3v0196880.1 | length: 344 aa. | |||
| IPR001739 | Methyl-CpG DNA binding | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Gene3D | G3DSA:3.30.890.10 | no description | 4.1e-30 | 159-276 |
| HMMPfam | PF01429 | MBD | 3e-13 | 197-256 |
| HMMSmart | SM00391 | Methyl-CpG | 1.1e-07 | 190-267 |
| ProfileScan | PS50982 | MBD | 16.562 | 186-260 |
| IPR011124 | Zinc finger, CW-type | |||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF07496 | zf-CW | 9.5e-15 | 127-178 |
| ProfileScan | PS51050 | ZF_CW | 12.909 | 121-180 |
| IPR016177 | DNA-binding, integrase-type | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| superfamily | SSF54171 | DNA-binding | 6.4e-32 | 164-293 |
| no_ID | ||||
| HMMPanther | PTHR15547 | FAMILY | 1.7e-70 | 34-300 |
| HMMPanther | PTHR15547:SF6 | MBD02 | 1.7e-70 | 34-300 |
| Seg | seg | seg | NA | 55-72 92-113 |
Lj5g3v0196880.1 nucl 8.5, cyto_nucl 5, cysk 2, plas 1.5, golg_plas 1.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v0196880.1 |