Miyakogusa Predicted Gene

Lj5g3v0186710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SGY5_LOTJA 277 100.0 100.0 (tr|I3SGY5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G47830.1 264 94.1 97.8 | Symbols: | SNARE-like superfamily protein | chr1:17613346-17614784 REVERSE LENGTH=142
Medicago Medtr1g025190.1 277 99.3 100.0 | clathrin adaptor complex small chain | HC | chr1:8026304-8024026 | 20130731
Soybean Glyma14g40430.2 276 99.3 100.0  
LJGI gnl|LJGI|TC59580 801 99.8 99.8 homologue to UniRef100_Q7X9R1 Cluster: Clathrin coat assembly protein; n=1; Gossypium barbadense|Rep: Clathrin coat assembly protein - Gossypium barbadense (Sea-island cotton) (Egyptian cotton), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0186710.1 length: 136 aa.
IPR011012 Longin-like domain
method AccNumber shortName E-value location
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 1.5e-47 1-136
IPR016635 Adaptor protein complex, sigma subunit
Molecular Function GO:0008565 protein transporter activity    
Biological Process GO:0015031 protein transport    
HMMPIR PIRSF015588 Adaptor 8.6e-88 1-136
HMMPanther PTHR11753 CLATHRIN 1.4e-90 1-135
IPR022775 AP complex, mu/sigma subunit
HMMPfam PF01217 Clat_adaptor_s 6.2e-53 1-135
IPR027156 AP-2 complex subunit sigma
Molecular Function GO:0008565 protein transporter activity    
Cellular Component GO:0030122 AP-2 adaptor complex    
HMMPanther PTHR11753:SF6 CLATHRIN 1.4e-90 1-135
no_ID  
Gene3D G3DSA:3.30.450.60 no description 4.6e-57 1-134
Wolf-PSORT
Lj5g3v0186710.1	mito 4.5, chlo 4, cyto 3, cyto_mito 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0186710.1