Miyakogusa Predicted Gene

Lj5g3v0144410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7MNY8_SOYBN 602 71.1 78.7 (tr|K7MNY8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G18570.1 155 33.9 47.5 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family protein | chr5:6171839-6174823 REVERSE LENGTH=681
Medicago Medtr1g023160.1 602 68.0 76.8 | GTP-binding protein Obg2, putative | HC | chr1:7356764-7361982 | 20130731
Soybean Glyma14g07630.1 367 77.5 83.3  
LJGI gnl|LJGI|TC82476 1068 100.0 100.0 similar to UniRef100_A7NT40 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0144410.1 length: 425 aa.
IPR006073 GTP binding domain
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00326 GTP1OBG 5.1e-34 208-228
229-247
264-279
281-299
HMMPfam PF01926 MMR_HSR1 4.5e-22 207-334
IPR006074 GTP1/OBG, conserved site
Molecular Function GO:0005525 GTP binding    
PatternScan PS00905 GTP1_OBG NA 266-279
IPR006169 GTP1/OBG domain
Molecular Function GO:0005525 GTP binding    
Gene3D G3DSA:2.70.210.12 no description 5e-20 44-186
HMMPfam PF01018 GTP1_OBG 1.5e-15 46-186
superfamily SSF82051 Obg 3.7e-21 44-204
IPR014100 GTP-binding protein Obg/CgtA
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
HMMPIR PIRSF002401 GTP-binding 1.2e-83 43-411
HMMPanther PTHR11702:SF3 MITOCHONDRIAL 3.3e-96 40-418
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.4e-44 196-416
no_ID  
Coil coil coiled-coil NA 405-426
Gene3D G3DSA:3.40.50.300 no description 2.7e-47 390-420
HMMPanther PTHR11702 DEVELOPMENTALLY 3.3e-96 40-418
Seg seg seg NA 285-298
389-400
Wolf-PSORT
Lj5g3v0144410.1	cyto 8, chlo 3, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0144410.1 Not targeted -50.268 -0.068 -9.176 74.92% -41.024