Miyakogusa Predicted Gene

Lj5g3v0144400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SCR9_LOTJA 369 99.4 99.4 (tr|I3SCR9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G06060.1 266 63.6 80.8 | Symbols: | LisH and RanBPM domains containing protein | chr1:1833071-1834516 FORWARD LENGTH=213
Medicago Medtr1g019870.1 328 77.6 89.1 | LisH and RanBPM domain protein | HC | chr1:6062059-6066368 | 20130731
Soybean Glyma04g03080.1 348 84.1 92.0  
LJGI gnl|LJGI|TC57462 1148 98.7 98.7 similar to UniRef100_A7NT43 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0144400.1 length: 201 aa.
IPR006594 LisH dimerisation motif
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50896 LISH 8.561 14-46
IPR006595 CTLH, C-terminal LisH motif
HMMSmart SM00668 C-terminal 8.7e-09 53-110
ProfileScan PS50897 CTLH 11.873 53-110
IPR013144 CRA domain
HMMSmart SM00757 CT11-RanBPM 5.4e-30 106-201
IPR024964 CTLH/CRA C-terminal to LisH motif domain
HMMPfam PF10607 CLTH 1.7e-34 54-191
no_ID  
HMMPanther PTHR12864 RAN 7.2e-52 6-201
Wolf-PSORT
Lj5g3v0144400.1	cyto 7.5, cyto_E.R. 4.5, nucl 4, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0144400.1