Miyakogusa Predicted Gene
- Lj5g3v0110950.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J4S1_SOYBN |
124 |
52.0 |
62.6 |
(tr|I1J4S1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G35510.1 |
82.4 |
51.7 |
67.8 |
| Symbols: SRO1 | similar to RCD one 1 | chr2:14916898-14919198 REVERSE LENGTH=568 |
| Medicago |
Medtr7g011550.1 |
95.5 |
58.6 |
74.3 |
| inactive poly [ADP-ribose] polymerase RCD1 | LC | chr7:3130244-3127740 | 20130731 |
| Soybean |
Glyma01g01900.6 |
124 |
52.0 |
62.6 |
|
| LJGI |
gnl|LJGI|TC64658 |
95.6 |
86.1 |
86.1 |
weakly similar to UniRef100_A7PC37 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0110950.1 |
length: 137 aa. |
| IPR012317 |
Poly(ADP-ribose) polymerase, catalytic domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003950 |
NAD+ ADP-ribosyltransferase activity |
|
|
| ProfileScan |
PS51059 |
PARP_CATALYTIC |
16.276 |
1-78 |
| no_ID |
|
| HMMPanther |
PTHR32263 |
FAMILY |
2.3e-23 |
1-64 |
| HMMPanther |
PTHR32263:SF0 |
SUBFAMILY |
2.3e-23 |
1-64 |
| Seg |
seg |
seg |
NA |
117-135 |
- Wolf-PSORT
Lj5g3v0110950.1 golg 5, chlo 2, cyto 2, nucl 1, mito 1, plas 1, vacu 1, E.R. 1, nucl_plas 1, E.R._vacu 1, cyto_pero 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0110950.1 |
|