Miyakogusa Predicted Gene

Lj5g3v0104750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 385 41.7 59.2 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 333 38.7 55.4 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 371 41.5 57.6 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 296 35.1 52.4  
LJGI gnl|LJGI|TC60576 418 88.9 88.9 similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0104750.1 length: 525 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.53 169-195
294-314
412-441
HMMPfam PF12854 PPR_1 2.8e-10 122-154
HMMPfam PF13041 PPR_2 6.3e-16 22-63
205-254
HMMTigr TIGR00756 PPR: 0.0019 22-54
129-164
170-198
208-242
243-274
ProfileScan PS51375 PPR 8.868 1-18
19-53
54-89
127-161
90-126
163-197
206-240
241-275
291-325
409-443
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.7e-09 129-312
no_ID  
HMMPanther PTHR24015 FAMILY 3.2e-75 3-464
HMMPanther PTHR24015:SF0 SUBFAMILY 3.2e-75 3-464
Wolf-PSORT
Lj5g3v0104750.1	chlo 5, nucl 4, cyto 2, E.R. 2, cysk_nucl 2, nucl_plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0104750.1