Miyakogusa Predicted Gene

Lj5g3v0104720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MXW0_SOYBN 926 77.9 83.0 (tr|I1MXW0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G75200.1 878 67.2 74.7 | Symbols: | flavodoxin family protein / radical SAM domain-containing protein | chr1:28220849-28223597 REVERSE LENGTH=647
Medicago Medtr1g022225.1 499 93.2 96.8 | tRNA wybutosine-synthesizing-like protein | HC | chr1:6957574-6955942 | 20130731
Soybean Glyma14g08150.1 976 74.6 80.7  
LJGI gnl|LJGI|TC78285 932 100.0 100.0 similar to UniRef100_A7NTC8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0104720.1 length: 726 aa.
IPR001094 Flavodoxin
method AccNumber shortName E-value location
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0010181 FMN binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00369 FLAVODOXIN 2.4e-12 137-150
185-196
223-233
248-267
IPR007197 Radical SAM
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF04055 Radical_SAM 2.1e-26 411-590
IPR008254 Flavodoxin/nitric oxide synthase
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF00258 Flavodoxin_1 6e-25 138-276
ProfileScan PS50902 FLAVODOXIN_LIKE 24.319 136-284
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 1.1e-14 414-611
IPR013917 tRNA wybutosine-synthesis
HMMPfam PF08608 Wyosine_form 2.7e-25 594-657
no_ID  
Gene3D G3DSA:3.40.50.360 no description 3.8e-37 137-287
HMMPanther PTHR13930 RSAFD1-RELATED 0 124-725
Seg seg seg NA 37-48
64-75
113-139
258-277
282-319
superfamily SSF102114 Radical 6.5e-11 407-591
superfamily SSF52218 Flavoproteins 1.6e-37 138-287
Wolf-PSORT
Lj5g3v0104720.1	nucl 4, cyto 4, cyto_nucl 4, chlo 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0104720.1