Miyakogusa Predicted Gene

Lj5g3v0083000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M8G5_SOYBN 724 83.1 88.4 (tr|I1M8G5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G19270.1 541 60.3 72.3 | Symbols: DA1 | DA1 | chr1:6663327-6665845 FORWARD LENGTH=532
Medicago Medtr1g021835.1 743 85.1 90.0 | zinc ion-binding protein | HC | chr1:6616869-6621939 | 20130731
Soybean Glyma14g08450.1 724 83.1 88.4  
LJGI gnl|LJGI|TC58401 1181 100.0 100.0 similar to UniRef100_A7NTJ6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0083000.1 length: 422 aa.
IPR001781 Zinc finger, LIM-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:2.10.110.10 no description 2e-15 114-184
HMMPfam PF00412 LIM 2.6e-08 115-169
HMMSmart SM00132 Zinc-binding 2.4e-09 114-166
PatternScan PS00478 LIM_DOMAIN_1 NA 115-149
ProfileScan PS50023 LIM_DOMAIN_2 11.623 113-173
IPR003903 Ubiquitin interacting motif
HMMSmart SM00726 Ubiquitin-interacting 0.48 40-59
71-90
ProfileScan PS50330 UIM 9.657 40-59
71-90
IPR022087 Protein of unknown function DUF3633
HMMPfam PF12315 DUF3633 3.7e-67 264-420
no_ID  
Coil coil coiled-coil NA 63-84
HMMPanther PTHR24209 FAMILY 1.3e-220 30-410
HMMPanther PTHR24209:SF6 SUBFAMILY 1.3e-220 30-410
superfamily SSF57716 Glucocorticoid 5.2e-09 105-140
141-218
Wolf-PSORT
Lj5g3v0083000.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0083000.1