Miyakogusa Predicted Gene

Lj5g3v0035410.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MXR5_SOYBN 555 89.6 92.3 (tr|I1MXR5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G47490.1 412 69.3 77.9 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C | chr1:17424801-17427182 FORWARD LENGTH=432
Medicago Medtr1g020080.1 501 80.5 87.9 | polyadenylate-binding protein RBP47C | HC | chr1:6171590-6176327 | 20130731
Soybean Glyma14g08840.1 549 88.6 92.3  
LJGI gnl|LJGI|TC70242 785 100.0 100.0 similar to UniRef100_Q93YF1 Cluster: Nucleic acid binding protein; n=1; Nicotiana tabacum|Rep: Nucleic acid binding protein - Nicotiana tabacum (Common tobacco), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0035410.2 length: 314 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.2e-21 2-54
85-155
190-253
HMMSmart SM00360 RNA 3.5e-23 1-66
84-158
189-256
ProfileScan PS50102 RRM 19.229 83-162
1-70
188-260
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.2e-26 2-69
76-173
174-264
no_ID  
HMMPanther PTHR24012 FAMILY 1.2e-158 1-314
HMMPanther PTHR24012:SF55 SUBFAMILY 1.2e-158 1-314
Seg seg seg NA 165-180
299-312
superfamily SSF54928 RNA-binding 2.3e-13 81-267
1-68
Wolf-PSORT
Lj5g3v0035410.2	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0035410.2