Miyakogusa Predicted Gene

Lj4g3v3115170.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KQM0_SOYBN 521 71.1 76.3 (tr|I1KQM0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G17880.2 397 56.4 70.7 | Symbols: HIP, ATTDX, ATHIP2, TDX | tetraticopeptide domain-containing thioredoxin | chr3:6123534-6126113 FORWARD LENGTH=373
Medicago Medtr8g107460.1 492 70.1 78.4 | tetratricopeptide domain thioredoxin | HC | chr8:45433683-45430136 | 20130731
Soybean Glyma08g06010.1 521 71.1 76.3  
LJGI gnl|LJGI|TC59595 1491 100.0 100.0 similar to UniRef100_Q8VZH4 Cluster: Tetratricoredoxin; n=1; Nicotiana tabacum|Rep: Tetratricoredoxin - Nicotiana tabacum (Common tobacco), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3115170.2 length: 370 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.7e-23 100-205
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 2.4e-30 253-368
ProfileScan PS51352 THIOREDOXIN_2 12.879 242-368
superfamily SSF52833 Thioredoxin-like 5.6e-34 221-369
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 17.817 102-203
IPR013766 Thioredoxin domain
Biological Process GO:0045454 cell redox homeostasis    
HMMPfam PF00085 Thioredoxin 6.8e-25 280-365
IPR017937 Thioredoxin, conserved site
Biological Process GO:0045454 cell redox homeostasis    
PatternScan PS00194 THIOREDOXIN_1 NA 286-304
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 1e+02 102-135
136-169
170-203
no_ID  
Coil coil coiled-coil NA 219-240
HMMPanther PTHR22904 TPR 5.1e-94 1-252
HMMPanther PTHR22904:SF34 HSC70-INTERACTING 5.1e-94 1-252
HMMPfam PF13414 TPR_11 5.4e-15 101-167
Seg seg seg NA 18-38
231-245
superfamily SSF48452 TPR-like 1.2e-22 93-245
Wolf-PSORT
Lj4g3v3115170.2	nucl 4.5, cyto 4, nucl_plas 3, chlo 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3115170.2