Miyakogusa Predicted Gene

Lj4g3v3115120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L544_SOYBN 1342 63.4 71.0 (tr|K7L544) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G48540.1 658 38.4 52.5 | Symbols: | Outer arm dynein light chain 1 protein | chr1:17945540-17950405 FORWARD LENGTH=1063
Medicago Medtr8g107440.1 1296 62.1 69.6 | outer arm dynein light chain 1 | HC | chr8:45414531-45424768 | 20130731
Soybean Glyma08g05990.1 1342 63.4 71.0  
LJGI gnl|LJGI|TC65052 1144 99.8 99.8 similar to UniRef100_A7PH98 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3115120.1 length: 1004 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 4.878 193-214
215-236
240-261
262-283
287-308
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 3.6e-07 194-232
no_ID  
Coil coil coiled-coil NA 356-377
Gene3D G3DSA:3.80.10.10 no description 4.9e-30 159-313
HMMPanther PTHR15454 NISCHARIN 1.4e-175 5-1001
HMMPanther PTHR15454:SF7 SUBFAMILY 1.4e-175 5-1001
HMMPfam PF13855 LRR_8 4.2e-07 242-298
HMMSmart SM00365 Leucine-rich 4.4 191-212
213-234
260-281
Seg seg seg NA 44-59
84-101
470-484
495-506
572-586
684-695
833-845
superfamily SSF52058 L 1.4e-29 175-312
Wolf-PSORT
Lj4g3v3115120.1	nucl 11, cyto 1, mito 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3115120.1