Miyakogusa Predicted Gene

Lj4g3v3115030.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q4R1J3_SOYBN 990 89.4 93.1 (tr|Q4R1J3) SEL-1 OS=Glycine max GN=Gm sel-1 PE=2 SV=1
TAIR_pep AT1G18260.1 885 81.3 91.9 | Symbols: | HCP-like superfamily protein | chr1:6279047-6282008 REVERSE LENGTH=678
Medicago Medtr8g107400.1 998 89.2 93.5 | Sel1 repeat protein | HC | chr8:45393423-45386715 | 20130731
Soybean Glyma05g33770.2 990 89.4 93.1  
LJGI gnl|LJGI|TC63014 1818 100.0 100.0 similar to UniRef100_Q4R1J3 Cluster: SEL-1; n=1; Glycine max|Rep: SEL-1 - Glycine max (Soybean), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3115030.1 length: 537 aa.
IPR006597 Sel1-like
method AccNumber shortName E-value location
HMMPfam PF08238 Sel1 7.3e-06 107-142
145-177
182-215
220-251
253-287
304-320
371-399
405-438
HMMSmart SM00671 Sel1-like 5.9e-06 107-143
144-179
180-216
217-252
253-288
369-404
405-440
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-32 101-247
248-439
no_ID  
HMMPanther PTHR11102 SEL-1-LIKE 1.5e-182 5-525
HMMPanther PTHR11102:SF11 SEL-1-LIKE 1.5e-182 5-525
Seg seg seg NA 508-525
superfamily SSF81901 HCP-like 6.3e-21 199-439
1-177
Wolf-PSORT
Lj4g3v3115030.1	chlo 5, mito 4, pero 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3115030.1