Miyakogusa Predicted Gene

Lj4g3v3114860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7LE58_MEDTR 930 75.8 83.9 (tr|G7LE58) Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Medicago truncatula GN=MTR_8g107280 PE=4 SV=1
TAIR_pep AT3G17970.1 669 58.8 72.6 | Symbols: atToc64-III, TOC64-III | translocon at the outer membrane of chloroplasts 64-III | chr3:6148030-6151794 FORWARD LENGTH=589
Medicago Medtr8g107280.1 930 75.8 83.9 | translocon at the outer membrane ofs-like protein | HC | chr8:45327392-45334135 | 20130731
Soybean Glyma05g33810.1 888 75.2 83.3  
LJGI gnl|LJGI|TC61165 1271 100.0 100.0 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3114860.1 length: 589 aa.
IPR000120 Amidase
method AccNumber shortName E-value location
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPanther PTHR11895 AMIDASE 3.5e-174 49-463
HMMPfam PF01425 Amidase 2.5e-50 53-440
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.2e-33 470-578
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 22.162 473-574
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.00088 542-574
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.016 473-506
507-540
541-574
ProfileScan PS50005 TPR 10.296 473-506
507-540
541-574
IPR023631 Amidase signature domain
Gene3D G3DSA:3.90.1300.10 no description 6.1e-73 24-446
superfamily SSF75304 Amidase 2.7e-67 55-446
no_ID  
HMMPanther PTHR11895:SF6 AMIDASE 3.5e-174 49-463
HMMPfam PF13414 TPR_11 1.7e-17 472-538
Seg seg seg NA 38-61
140-152
458-469
superfamily SSF48452 TPR-like 2.1e-28 464-577
Wolf-PSORT
Lj4g3v3114860.1	chlo 7, extr 3, vacu 2, nucl 1, mito 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3114860.1