Miyakogusa Predicted Gene

Lj4g3v3114830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL J7JYT7_LOTJA 630 85.2 85.5 (tr|J7JYT7) NARROW ORGAN 1 OS=Lotus japonicus GN=NAO1 PE=2 SV=1
TAIR_pep AT3G18010.1 189 39.6 49.1 | Symbols: WOX1 | WUSCHEL related homeobox 1 | chr3:6161155-6163183 REVERSE LENGTH=350
Medicago Medtr8g107210.1 364 58.0 66.1 | stenofolia-like protein | HC | chr8:45305362-45303362 | 20130731
Soybean Glyma05g33850.1 440 70.1 73.4  
LJGI gnl|LJGI|BP048885 666 100.0 100.0 homologue to UniRef100_A7PH59 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3114830.1 length: 336 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.1e-19 54-113
HMMSmart SM00389 Homeodomain 9.5e-05 51-118
ProfileScan PS50071 HOMEOBOX_2 11.451 59-114
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.8e-08 54-113
superfamily SSF46689 Homeodomain-like 2.3e-12 52-123
no_ID  
Seg seg seg NA 176-184
236-247
Wolf-PSORT
Lj4g3v3114830.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3114830.1