Miyakogusa Predicted Gene

Lj4g3v3114630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KRF4_SOYBN 1357 87.5 94.9 (tr|K7KRF4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G02750.1 1103 68.5 83.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:1221116-1223461 REVERSE LENGTH=781
Medicago Medtr8g106950.1 1353 86.8 93.3 | pentatricopeptide (PPR) repeat protein | HC | chr8:45164389-45168068 | 20130731
Soybean Glyma05g34000.1 1276 87.7 94.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3114630.1 length: 771 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00037 57-83
86-115
117-146
148-175
179-202
272-301
335-364
365-394
539-562
HMMPfam PF12854 PPR_1 4.9e-07 235-265
HMMPfam PF13041 PPR_2 3.8e-12 463-511
HMMPfam PF13812 PPR_3 0.0076 303-333
HMMTigr TIGR00756 PPR: 1e-06 86-116
117-147
148-174
179-202
210-241
241-265
272-300
303-333
335-365
365-398
466-500
ProfileScan PS51375 PPR 7.728 146-180
84-118
53-83
119-145
270-304
239-269
208-238
181-207
332-366
305-331
367-397
398-432
464-498
433-463
535-565
499-529
601-635
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.2e-09 64-202
594-621
no_ID  
HMMPanther PTHR24015 FAMILY 0 38-771
HMMPanther PTHR24015:SF125SUBFAMILY NOT 0 38-771
HMMPfam PF14432 DYW_deaminase 1.1e-18 649-761
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-19
Seg seg seg NA 4-29
32-44
superfamily SSF48452 TPR-like 0.0018 163-299
337-627
Wolf-PSORT
Lj4g3v3114630.1	chlo 7, pero 5, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3114630.1