Miyakogusa Predicted Gene
- Lj4g3v3114350.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K5E7_SOYBN |
595 |
77.2 |
86.7 |
(tr|I1K5E7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G48635.1 |
399 |
54.0 |
70.6 |
| Symbols: PEX3, PEX3-2 | peroxin 3 | chr1:17983951-17985966 FORWARD LENGTH=364 |
| Medicago |
Medtr8g106780.1 |
561 |
73.0 |
82.7 |
| peroxisome biogenesis protein | HC | chr8:45075754-45070010 | 20130731 |
| Soybean |
Glyma05g34080.1 |
595 |
77.2 |
86.7 |
|
| LJGI |
gnl|LJGI|TC78846 |
2151 |
99.3 |
99.3 |
similar to UniRef100_A7PH34 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3114350.1 |
length: 369 aa. |
| IPR006966 |
Peroxin-3 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005779 |
integral to peroxisomal membrane |
|
|
| Biological Process |
GO:0007031 |
peroxisome organization |
|
|
| HMMPfam |
PF04882 |
Peroxin-3 |
2.6e-56 |
3-366 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
32-60 |
| HMMPanther |
PTHR22950 |
AMINO |
3.2e-28 |
31-302 |
| HMMPanther |
PTHR22950:SF1 |
AMINO |
3.2e-28 |
31-302 |
| Seg |
seg |
seg |
NA |
36-55 |
- Wolf-PSORT
Lj4g3v3114350.1 cyto 8, nucl 3, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3114350.1 |
|