Miyakogusa Predicted Gene

Lj4g3v3113820.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A0PEY0_LOTJA 1181 96.1 96.1 (tr|A0PEY0) Cytokinin receptor 1 OS=Lotus japonicus GN=hk1 PE=2 SV=1
TAIR_pep AT2G01830.2 753 65.1 75.4 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain containing histidine kinase protein | chr2:363332-368016 REVERSE LENGTH=1080
Medicago Medtr8g106150.2 1008 82.0 87.3 | cytokinin receptor histidine kinase | HC | chr8:44824480-44817990 | 20130731
Soybean Glyma08g05370.1 1002 82.3 87.2  
LJGI gnl|LJGI|TC57121 3550 100.0 100.0 UniRef100_A0PEY0 Cluster: Cytokinin receptor 1; n=1; Lotus japonicus|Rep: Cytokinin receptor 1 - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3113820.2 length: 596 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 2.1e-20 454-584
HMMSmart SM00448 cheY-homologous 1.7e-32 452-584
ProfileScan PS50110 RESPONSE_REGULATORY 29.617 453-588
IPR003594 Histidine kinase-like ATPase, ATP-binding domain
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.565.10 no description 8.7e-42 203-278
HMMPfam PF02518 HATPase_c 1.3e-33 97-280
HMMSmart SM00387 Histidine 7.1e-32 97-282
superfamily SSF55874 ATPase 8.1e-40 39-277
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMPfam PF00512 HisKA 1.9e-07 2-50
IPR004358 Signal transduction histidine kinase-related protein, C-terminal
Biological Process GO:0016310 phosphorylation    
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
FPrintScan PR00344 BCTRLSENSOR 5.8e-14 207-221
225-235
242-260
266-279
IPR005467 Signal transduction histidine kinase, core
ProfileScan PS50109 HIS_KIN 35.190 1-282
IPR009082 Signal transduction histidine kinase, homodimeric domain
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
superfamily SSF47384 Homodimeric 3.1e-07 1-52
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 1.7e-08 451-589
299-434
no_ID  
Coil coil coiled-coil NA 35-56
Gene3D G3DSA:3.40.50.2300 no description 2.3e-39 302-431
451-591
HMMPanther PTHR24423 TWO 5.7e-125 1-595
HMMPanther PTHR24423:SF360HYBRID SIGNAL 5.7e-125 1-595
Seg seg seg NA 3-12
530-542
Wolf-PSORT
Lj4g3v3113820.2	chlo 8, extr 3, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3113820.2 Not targeted -45.462 -0.994 -10.229 65.53% -34.239