Miyakogusa Predicted Gene

Lj4g3v3113210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K5J7_SOYBN 1098 86.8 90.3 (tr|I1K5J7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G68050.1 967 79.9 87.6 | Symbols: ADO3, FKF1 | flavin-binding, kelch repeat, f box 1 | chr1:25508737-25510697 FORWARD LENGTH=619
Medicago Medtr8g105590.1 1062 82.9 87.4 | flavin-binding kelch repeat F-box protein, putative | HC | chr8:44541297-44538292 | 20130731
Soybean Glyma05g34530.1 1098 86.8 90.3  
LJGI gnl|LJGI|TC59193 2906 100.0 100.0 similar to UniRef100_A7P3V7 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3113210.1 length: 643 aa.
IPR000014 PAS domain
method AccNumber shortName E-value location
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
HMMTigr TIGR00229 sensory_box: 8e-08 88-184
ProfileScan PS50112 PAS 8.687 90-121
superfamily SSF55785 PYP-like 4e-22 73-186
IPR001610 PAC motif
HMMSmart SM00086 Motif 0.00038 149-190
IPR001810 F-box domain, cyclin-like
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 4e-05 234-271
superfamily SSF81383 F-box 6.9e-10 224-284
IPR011043 Galactose oxidase/kelch, beta-propeller
superfamily SSF50965 Galactose 2.4e-38 311-635
IPR011498 Kelch repeat type 2
Molecular Function GO:0005515 protein binding    
HMMPfam PF07646 Kelch_2 1.6e-05 553-599
IPR015915 Kelch-type beta propeller
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.120.10.80 no description 2e-10 314-518
519-641
no_ID  
Coil coil coiled-coil NA 4-25
Gene3D G3DSA:1.20.1280.50 no description 5.1e-07 234-313
Gene3D G3DSA:3.30.450.20 no description 7.5e-29 76-185
HMMPanther PTHR23244 KELCH 0 83-639
HMMPanther PTHR23244:SF9 ADAGIO 0 83-639
HMMPfam PF13415 Kelch_3 1.5e-08 393-440
442-493
HMMPfam PF13418 Kelch_4 3.9e-12 327-378
HMMPfam PF13426 PAS_9 5.7e-20 84-185
Seg seg seg NA 5-17
38-59
612-626
Wolf-PSORT
Lj4g3v3113210.1	cyto_nucl 6, nucl 5.5, cyto 5.5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3113210.1