Miyakogusa Predicted Gene

Lj4g3v3113150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K5K4_SOYBN 422 62.6 67.5 (tr|I1K5K4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G68070.1 349 51.1 61.4 | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:25515412-25516767 REVERSE LENGTH=343
Medicago Medtr8g105330.1 392 60.8 65.7 | zinc finger, C3HC4 type (RING finger) protein | HC | chr8:44439492-44443627 | 20130731
Soybean Glyma05g34580.1 422 62.6 67.5  
LJGI gnl|LJGI|TC65678 2050 99.9 99.9 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3113150.1 length: 344 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 6.7e-14 292-334
HMMSmart SM00184 Ring 1.2e-05 293-333
ProfileScan PS50089 ZF_RING_2 12.548 293-334
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.5e-16 289-337
no_ID  
HMMPanther PTHR11203 CLEAVAGE 3.4e-66 34-204
HMMPanther PTHR11203:SF8 INTEGRATOR 3.4e-66 34-204
Seg seg seg NA 41-53
128-156
196-209
213-232
superfamily SSF57850 RING/U-box 3.6e-19 281-340
Wolf-PSORT
Lj4g3v3113150.1	plas 8, E.R. 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3113150.1