Miyakogusa Predicted Gene

Lj4g3v3113120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQB7_SOYBN 2650 88.2 91.5 (tr|I1KQB7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G14850.1 2052 70.2 80.8 | Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5123259 REVERSE LENGTH=1464
Medicago Medtr8g105290.1 2593 86.3 90.6 | nuclear pore complex Nup155-like protein | HC | chr8:44427185-44416638 | 20130731
Soybean Glyma08g05070.1 2650 88.2 91.5  
LJGI gnl|LJGI|DC598168 1096 99.8 99.8 similar to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3113120.1 length: 1482 aa.
IPR004870 Nucleoporin, Nup155-like
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
Biological Process GO:0006913 nucleocytoplasmic transport    
Molecular Function GO:0017056 structural constituent of nuclear pore    
HMMPanther PTHR10350 NUCLEAR 0 5-1480
IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal
HMMPfam PF03177 Nucleoporin_C 5.7e-120 690-1330
IPR014908 Nucleoporin, Nup133/Nup155-like, N-terminal
HMMPfam PF08801 Nucleoporin_N 4.1e-80 56-541
no_ID  
HMMPanther PTHR10350:SF6 NUCLEOPORIN 0 5-1480
Seg seg seg NA 351-362
440-447
1052-1063
1121-1133
1379-1398
Wolf-PSORT
Lj4g3v3113120.1	nucl 7, E.R. 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3113120.1