- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SN03_LOTJA |
601 |
91.6 |
91.6 |
(tr|I3SN03) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G01620.1 |
183 |
37.5 |
54.4 |
| Symbols: MEE11 | RNI-like superfamily protein | chr2:278204-279226 FORWARD LENGTH=292 |
| Medicago |
Medtr8g104920.1 |
438 |
66.3 |
76.8 |
| F-box SKIP28-like protein | HC | chr8:44233342-44235029 | 20130731 |
| Soybean |
Glyma05g34920.1 |
449 |
68.7 |
77.4 |
|
| LJGI |
gnl|LJGI|TC59531 |
1921 |
100.0 |
100.0 |
weakly similar to UniRef100_A7P3T3 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3112880.1 |
length: 322 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
2.4e-06 |
27-62 |
| ProfileScan |
PS50181 |
FBOX |
8.888 |
20-67 |
| superfamily |
SSF81383 |
F-box |
8.2e-06 |
27-62 |
| IPR017900 |
4Fe-4S ferredoxin, iron-sulphur binding, conserved site |
| PatternScan |
PS00198 |
4FE4S_FER_1 |
NA |
239-250 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
7.5e-11 |
27-172 |
| HMMPanther |
PTHR23125 |
F-BOX/LEUCINE |
1.4e-38 |
28-292 |
| HMMPanther |
PTHR23125:SF96 |
PUTATIVE |
1.4e-38 |
28-292 |
| Seg |
seg |
seg |
NA |
249-274 |
| superfamily |
SSF52047 |
RNI-like |
6.2e-06 |
80-180 |
- Wolf-PSORT
Lj4g3v3112880.1 chlo 3, cyto 3, E.R. 2, chlo_mito 2, cyto_plas 2, nucl 1.5, cysk_nucl 1.5, E.R._vacu 1.5, cyto_pero 1.5, E.R._plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3112880.1 |
|