Miyakogusa Predicted Gene
- Lj4g3v3111700.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K5N5_SOYBN |
203 |
89.6 |
95.3 |
(tr|I1K5N5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G70710.1 |
181 |
78.3 |
87.7 |
| Symbols: ATGH9B1, CEL1, GH9B1 | glycosyl hydrolase 9B1 | chr1:26659356-26662962 REVERSE LENGTH=492 |
| Medicago |
Medtr8g104820.1 |
192 |
86.8 |
90.6 |
| glycosyl hydrolase family 9 protein | HC | chr8:44151627-44156037 | 20130731 |
| Soybean |
Glyma05g34850.1 |
203 |
89.6 |
95.3 |
|
| LJGI |
gnl|LJGI|TC79417 |
60.0 |
100.0 |
100.0 |
similar to UniRef100_Q2HZY0 Cluster: Endo-1,4-beta-glucanase; n=1; Glycine max|Rep: Endo-1,4-beta-glucanase - Glycine max (Soybean), partial (56%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3111700.1 |
length: 106 aa. |
| IPR001701 |
Glycoside hydrolase, family 9 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00759 |
Glyco_hydro_9 |
5.4e-20 |
7-106 |
| IPR008928 |
Six-hairpin glycosidase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF48208 |
Six-hairpin |
1.6e-17 |
3-106 |
| IPR012341 |
Six-hairpin glycosidase |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:1.50.10.10 |
no description |
1.1e-18 |
8-106 |
| no_ID |
|
| HMMPanther |
PTHR22298 |
ENDO-1,4-BETA-GLUCANASE |
3.2e-41 |
1-106 |
| HMMPanther |
PTHR22298:SF3 |
ENDO-1,4-BETA-GLUCANASE |
3.2e-41 |
1-106 |
- Wolf-PSORT
Lj4g3v3111700.1 nucl 8, chlo 2, cyto 2, extr 1, cysk 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3111700.1 |
|