Miyakogusa Predicted Gene

Lj4g3v3099530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A0ZT53_LOTJA 2415 94.4 94.5 (tr|A0ZT53) Putative E3 ubiquitin ligase OS=Lotus japonicus GN=LjnsRING PE=2 SV=1
TAIR_pep AT3G18290.1 1597 65.4 76.6 | Symbols: EMB2454, BTS | zinc finger protein-related | chr3:6274308-6280174 FORWARD LENGTH=1254
Medicago Medtr8g104410.1 2068 81.5 87.3 | CHY zinc finger protein | HC | chr8:43980913-43994829 | 20130731
Soybean Glyma05g34730.1 2147 85.4 90.3  
LJGI gnl|LJGI|TC71386 7343 99.9 99.9 similar to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3099530.1 length: 1236 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 3.2e-09 1120-1164
HMMSmart SM00184 Ring 9.9e-06 1121-1162
ProfileScan PS50089 ZF_RING_2 11.427 1121-1163
IPR004039 Rubredoxin-type fold
Gene3D G3DSA:2.20.28.10 no description 3.9e-16 1191-1229
IPR008913 Zinc finger, CHY-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF05495 zf-CHY 5.2e-17 992-1069
ProfileScan PS51266 ZF_CHY 25.516 985-1054
IPR012312 Haemerythrin/HHE cation-binding motif
HMMPfam PF01814 Hemerythrin 5.3e-07 46-171
297-431
646-809
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1e-09 1119-1166
IPR017921 Zinc finger, CTCHY-type
ProfileScan PS51270 ZF_CTCHY 29.396 1057-1120
no_ID  
Gene3D G3DSA:1.20.120.520 no description 2.8e-39 34-219
295-513
771-857
HMMPanther PTHR21319 RING 0 51-1233
Seg seg seg NA 7-30
505-516
611-629
1176-1188
superfamily SSF57850 RING/U-box 4e-12 1114-1184
Wolf-PSORT
Lj4g3v3099530.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3099530.1