Miyakogusa Predicted Gene

Lj4g3v3099310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6T790_SOYBN 385 59.1 62.1 (tr|C6T790) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G73840.1 89.7 42.4 50.2 | Symbols: ESP1 | hydroxyproline-rich glycoprotein family protein | chr1:27763937-27766328 REVERSE LENGTH=388
Medicago Medtr8g104260.1 371 57.2 60.2 | hydroxyproline-rich glycoprotein-like protein | HC | chr8:43905814-43900142 | 20130731
Soybean Glyma10g04650.1 385 59.1 62.1  
LJGI gnl|LJGI|TC67428 2309 100.0 100.0 similar to UniRef100_O81698 Cluster: Proline-rich protein; n=1; Glycine max|Rep: Proline-rich protein - Glycine max (Soybean), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3099310.1 length: 400 aa.
IPR025742 Cleavage stimulation factor subunit 2, hinge domain
method AccNumber shortName E-value location
HMMPfam PF14327 CSTF2_hinge 1.3e-21 17-80
IPR026896 Transcription termination and cleavage factor C-terminal domain
HMMPfam PF14304 CSTF_C 1.4e-08 366-400
no_ID  
HMMPanther PTHR23139 RNA-BINDING 4.7e-44 17-400
HMMPanther PTHR23139:SF13 CLEAVAGE 4.7e-44 17-400
Seg seg seg NA 8-16
38-54
70-89
95-106
165-181
184-197
220-232
283-295
Wolf-PSORT
Lj4g3v3099310.1	nucl 12, chlo 1, cyto 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3099310.1