Miyakogusa Predicted Gene

Lj4g3v3098160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L912_MEDTR 360 83.8 86.5 (tr|G7L912) Protein CASP OS=Medicago truncatula GN=MTR_8g103950 PE=4 SV=1
TAIR_pep AT3G18480.1 303 72.2 79.8 | Symbols: AtCASP, CASP | CCAAT-displacement protein alternatively spliced product | chr3:6336924-6341596 FORWARD LENGTH=689
Medicago Medtr8g103950.2 361 83.8 86.5 | CASP carboxy-terminal protein | HC | chr8:43763207-43755474 | 20130731
Soybean Glyma07g09890.3 351 82.8 85.1  
LJGI gnl|LJGI|TC68685 424 84.0 84.0 similar to UniRef100_A7PGQ5 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3098160.1 length: 241 aa.
IPR012955 CASP, C-terminal
method AccNumber shortName E-value location
Biological Process GO:0006891 intra-Golgi vesicle-mediated transport    
Cellular Component GO:0030173 integral to Golgi membrane    
HMMPfam PF08172 CASP_C 2.3e-31 78-239
no_ID  
Coil coil coiled-coil NA 64-106
152-194
HMMPanther PTHR14043 CCAAT 3.5e-59 1-241
HMMPanther PTHR14043:SF2 CASP 3.5e-59 1-241
Seg seg seg NA 161-174
Wolf-PSORT
Lj4g3v3098160.1	nucl 8, cyto 3, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3098160.1