Miyakogusa Predicted Gene
- Lj4g3v3097120.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K3H6_SOYBN |
144 |
33.3 |
47.7 |
(tr|K7K3H6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G05642.1 |
70.9 |
30.3 |
59.6 |
| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:2098253-2100867 REVERSE LENGTH=532 |
| Medicago |
Medtr3g055660.1 |
108 |
35.5 |
55.3 |
| plant OB fold protein | LC | chr3:21910372-21907746 | 20130731 |
| Soybean |
Glyma18g33200.1 |
80.9 |
37.9 |
55.6 |
|
| LJGI |
gnl|LJGI|FS335826 |
928 |
99.8 |
99.8 |
weakly similar to UniRef100_A7BPV8 Cluster: Protein involved in sulfur oxidation dsrL; n=1; Beggiatoa sp. PS|Rep: Protein involved in sulfur oxidation dsrL - Beggiatoa sp. PS, partial (3%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3097120.1 |
length: 371 aa. |
| IPR003871 |
Domain of unknown function DUF223 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02721 |
DUF223 |
2.1e-14 |
40-135 |
| IPR012340 |
Nucleic acid-binding, OB-fold |
| Gene3D |
G3DSA:2.40.50.140 |
no description |
1.4e-09 |
8-104 |
| superfamily |
SSF50249 |
Nucleic |
1.6e-12 |
2-106 |
| no_ID |
|
| HMMPanther |
PTHR23273 |
REPLICATION |
3.1e-15 |
1-140 |
| Seg |
seg |
seg |
NA |
321-330 |
- Wolf-PSORT
Lj4g3v3097120.1 cyto 8, nucl 3, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3097120.1 |
|