Miyakogusa Predicted Gene

Lj4g3v3061490.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L4R9_SOYBN 556 84.2 91.6 (tr|K7L4R9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06880.2 143 29.3 54.8 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:2170516-2175686 REVERSE LENGTH=1264
Medicago Medtr8g103227.1 551 84.8 90.3 | E3 ubiquitin-protein ligase LIN-like protein, putative | HC | chr8:43449553-43456981 | 20130731
Soybean Glyma05g35600.1 429 80.3 87.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3061490.3 length: 310 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 4.1e-07 30-55
64-99
HMMSmart SM00320 WD40 2.1 18-55
60-99
180-226
229-265
268-308
ProfileScan PS50082 WD_REPEATS_2 12.380 67-100
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 8.8e-32 148-307
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 9.995 42-108
235-310
superfamily SSF50978 WD40 3.7e-33 17-310
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 7.1e-05 42-56
86-100
295-309
no_ID  
HMMPanther PTHR22844 F-BOX 1.9e-29 17-307
Wolf-PSORT
Lj4g3v3061490.3	cyto 9, nucl 3, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3061490.3