Miyakogusa Predicted Gene

Lj4g3v3061490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L875_MEDTR 858 76.6 82.3 (tr|G7L875) U-box domain-containing protein OS=Medicago truncatula GN=MTR_8g103190 PE=4 SV=1
TAIR_pep AT5G42340.1 80.1 47.3 68.9 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16930367 REVERSE LENGTH=660
Medicago Medtr8g103227.1 865 77.5 83.4 | E3 ubiquitin-protein ligase LIN-like protein, putative | HC | chr8:43449553-43456981 | 20130731
Soybean Glyma05g35600.1 795 73.6 81.9  
LJGI gnl|LJGI|TC72825 113 98.4 98.4  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3061490.1 length: 563 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 3e-15 128-199
HMMSmart SM00504 Modified 1.4e-25 130-194
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.5e-26 126-199
no_ID  
HMMPanther PTHR22904 TPR 3.2e-25 125-503
HMMPanther PTHR22904:SF145PROTEIN DIA2 3.2e-25 125-503
Seg seg seg NA 8-23
35-42
116-129
537-545
superfamily SSF57850 RING/U-box 7.8e-23 126-201
Wolf-PSORT
Lj4g3v3061490.1	cyto 7, nucl 4, chlo 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3061490.1