Miyakogusa Predicted Gene
- Lj4g3v3058230.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L4M1_SOYBN |
209 |
86.0 |
93.0 |
(tr|I1L4M1) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT1G77210.2 |
183 |
78.9 |
87.2 |
| Symbols: STP14 | sugar transporter 14 | chr1:29009036-29010980 REVERSE LENGTH=504 |
| Medicago |
Medtr6g087040.1 |
206 |
83.3 |
90.4 |
| sugar porter (SP) family MFS transporter | HC | chr6:33563803-33566317 | 20130731 |
| Soybean |
Glyma05g35710.1 |
206 |
82.9 |
91.5 |
|
| LJGI |
gnl|LJGI|TC59924 |
280 |
86.6 |
86.6 |
similar to UniRef100_Q7XA51 Cluster: Monosaccharide transporter; n=1; Glycine max|Rep: Monosaccharide transporter - Glycine max (Soybean), partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3058230.1 |
length: 117 aa. |
| IPR005828 |
General substrate transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0022857 |
transmembrane transporter activity |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF00083 |
Sugar_tr |
6.5e-22 |
1-91 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
3.2e-10 |
1-90 |
| IPR020846 |
Major facilitator superfamily domain |
| ProfileScan |
PS50850 |
MFS |
13.738 |
1-83 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
3.9e-05 |
11-84 |
| HMMPanther |
PTHR24063 |
FAMILY |
9.9e-65 |
1-114 |
| HMMPanther |
PTHR24063:SF72 |
SUBFAMILY |
9.9e-65 |
1-114 |
- Wolf-PSORT
Lj4g3v3058230.1 chlo 4, extr 3, cyto 2, mito 1, plas 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, golg_plas 1, E.R._vacu 1, cyto_pero 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3058230.1 |
|