Miyakogusa Predicted Gene

Lj4g3v3042720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KPV4_SOYBN 580 80.7 90.2 (tr|I1KPV4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G29240.1 464 63.6 78.1 | Symbols: | Leucine-rich repeat (LRR) family protein | chr4:14418826-14420073 FORWARD LENGTH=415
Medicago Medtr8g102260.1 563 79.3 87.9 | LRR/extensin | HC | chr8:43029705-43031050 | 20130731
Soybean Glyma08g03610.1 580 80.7 90.2  
LJGI gnl|LJGI|TC78995 369 83.3 83.3 similar to UniRef100_A7PEE8 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3042720.1 length: 408 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.48 163-180
188-207
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 0.00017 63-98
no_ID  
FPrintScan PR00019 LEURICHRPT 6.6e-05 164-177
304-317
Gene3D G3DSA:3.80.10.10 no description 1.4e-65 61-352
HMMPanther PTHR26393 FAMILY 1.5e-174 56-396
HMMPanther PTHR26393:SF18 SUBFAMILY 1.5e-174 56-396
Seg seg seg NA 5-19
25-54
superfamily SSF52058 L 2.7e-55 57-362
Wolf-PSORT
Lj4g3v3042720.1	extr 4, chlo 3, nucl 2, cyto 2, vacu 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3042720.1