Miyakogusa Predicted Gene
- Lj4g3v3017340.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K636_SOYBN |
660 |
91.7 |
95.7 |
(tr|I1K636) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G56750.1 |
586 |
80.0 |
91.6 |
| Symbols: NDL1 | N-MYC downregulated-like 1 | chr5:22957986-22960606 FORWARD LENGTH=346 |
| Medicago |
Medtr8g101710.1 |
657 |
91.6 |
96.2 |
| pollen-specific SF21-like protein | HC | chr8:42762703-42766823 | 20130731 |
| Soybean |
Glyma05g36270.1 |
660 |
91.7 |
95.7 |
|
| LJGI |
gnl|LJGI|TC59830 |
2093 |
100.0 |
100.0 |
similar to UniRef100_A7PEA8 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3017340.1 |
length: 350 aa. |
| IPR004142 |
Ndr |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11034 |
N-MYC |
6.4e-257 |
1-349 |
| HMMPfam |
PF03096 |
Ndr |
1.8e-115 |
26-310 |
| IPR015511 |
Pollen specific protein SF21 |
| HMMPanther |
PTHR11034:SF3 |
POLLEN |
6.4e-257 |
1-349 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
1.1e-93 |
18-305 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
5.3e-31 |
26-303 |
- Wolf-PSORT
Lj4g3v3017340.1 chlo 4, nucl 3.5, cysk_nucl 2.5, plas 2, cyto 1, mito 1, vacu 1, E.R. 1, golg_plas 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3017340.1 |
|