Miyakogusa Predicted Gene

Lj4g3v3014540.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KPN8_SOYBN 570 72.2 82.9 (tr|I1KPN8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G64610.2 266 55.3 67.2 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:23998920-24001297 REVERSE LENGTH=647
Medicago Medtr8g100005.1 524 71.1 79.0 | transducin/WD40 repeat protein | HC | chr8:42372817-42368175 | 20130731
Soybean Glyma05g36560.1 565 72.7 82.7  
LJGI gnl|LJGI|FS343233 593 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3014540.2 length: 370 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 8.2e-08 188-222
289-324
330-367
HMMSmart SM00320 WD40 6.7e-09 183-222
287-325
328-367
ProfileScan PS50082 WD_REPEATS_2 14.251 190-231
294-326
334-370
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.8e-35 284-368
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 15.716 190-370
superfamily SSF50978 WD40 3.6e-32 182-368
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 1.4e-06 209-223
312-326
354-368
no_ID  
HMMPanther PTHR14221 WD 5.4e-89 89-370
HMMPanther PTHR14221:SF0 SUBFAMILY 5.4e-89 89-370
Seg seg seg NA 258-269
Wolf-PSORT
Lj4g3v3014540.2	nucl 8.5, cyto_nucl 7, cyto 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3014540.2