Miyakogusa Predicted Gene

Lj4g3v3014540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KPN8_SOYBN 1132 76.5 84.5 (tr|I1KPN8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G24320.1 506 42.9 58.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:8284858-8287651 REVERSE LENGTH=694
Medicago Medtr8g100005.1 1054 74.0 81.4 | transducin/WD40 repeat protein | HC | chr8:42372817-42368175 | 20130731
Soybean Glyma05g36560.1 1119 76.2 84.1  
LJGI gnl|LJGI|FS343233 967 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3014540.1 length: 706 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 1.9e-07 251-285
352-387
393-430
HMMSmart SM00320 WD40 9.3 246-285
350-388
391-430
433-471
486-522
523-563
658-698
ProfileScan PS50082 WD_REPEATS_2 13.182 253-294
357-389
397-431
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.4e-59 677-698
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 14.529 253-439
superfamily SSF50978 WD40 8.1e-52 245-563
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 7.6e-06 272-286
375-389
417-431
no_ID  
HMMPanther PTHR14221 WD 2.8e-168 152-706
HMMPanther PTHR14221:SF0 SUBFAMILY 2.8e-168 152-706
Seg seg seg NA 23-38
321-332
Wolf-PSORT
Lj4g3v3014540.1	nucl 10, cyto 2, plas 1, vacu 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3014540.1