Miyakogusa Predicted Gene

Lj4g3v3014220.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SBH1_LOTJA 160 94.0 95.2 (tr|I3SBH1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep AT5G42070.1 127 85.1 92.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164

Medicago Medtr8g099615.1 155 56.7 64.5 | hypothetical protein | HC | chr8:42117910-42119726 | 20130731

Soybean Glyma05g36760.1 144 78.5 82.8

LJGI gnl|LJGI|TC65298 928 99.2 99.2 homologue to UniRef100_A7QU77 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v3014220.1 length: 159 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 22-45
147-159

Wolf-PSORT

Lj4g3v3014220.1 nucl 7, chlo 3, mito 2, cyto 1, plas 1, cyto_mito 1, cyto_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v3014220.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SBH1_LOTJA	160	94.0	95.2	(tr\|I3SBH1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	AT5G42070.1	127	85.1	92.5	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:16819118-16820119 REVERSE LENGTH=164
Medicago	Medtr8g099615.1	155	56.7	64.5	\| hypothetical protein \| HC \| chr8:42117910-42119726 \| 20130731
Soybean	Glyma05g36760.1	144	78.5	82.8
LJGI	gnl\|LJGI\|TC65298	928	99.2	99.2	homologue to UniRef100_A7QU77 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

no_ID
Lj4g3v3014220.1				length: 159 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	22-45 147-159