Miyakogusa Predicted Gene

Lj4g3v3014190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L4K2_SOYBN 1751 70.8 79.1 (tr|K7L4K2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G10940.1 239 60.9 71.9 | Symbols: | RING/U-box protein | chr4:6708982-6710923 REVERSE LENGTH=192
Medicago Medtr8g099585.1 1687 68.6 76.8 | RING/U-box protein | HC | chr8:42080666-42090727 | 20130731
Soybean Glyma08g02770.1 990 63.9 70.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3014190.1 length: 1250 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 1.5 35-73
125-184
ProfileScan PS50089 ZF_RING_2 11.368 35-74
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 2.3e-08 133-185
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 3.3e-10 145-185
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.8e-10 32-82
147-188
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 51-60
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 2.1e-09 147-186
ProfileScan PS50016 ZF_PHD_2 9.170 67-187
no_ID  
Coil coil coiled-coil NA 513-534
HMMPanther PTHR10694 JUMONJI 3.7e-72 31-437
HMMPanther PTHR10694:SF14 OS12G0209700 3.7e-72 31-437
HMMPfam PF13923 zf-C3HC4_2 8.1e-08 33-75
Seg seg seg NA 559-570
837-850
superfamily SSF57850 RING/U-box 2e-14 28-97
Wolf-PSORT
Lj4g3v3014190.1	nucl 13.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3014190.1