Miyakogusa Predicted Gene

Lj4g3v3002670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K6A8_SOYBN 303 56.1 62.0 (tr|I1K6A8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G23800.1 218 41.3 54.2 | Symbols: | HMG (high mobility group) box protein | chr4:12390228-12392516 FORWARD LENGTH=456
Medicago Medtr8g099305.1 285 52.2 60.9 | high mobility group (HMG)-box protein | HC | chr8:41820095-41822791 | 20130731
Soybean Glyma05g37010.1 303 56.1 62.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3002670.1 length: 333 aa.
IPR009071 High mobility group (HMG) box domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.30.10 no description 3.7e-13 148-208
263-313
HMMPfam PF00505 HMG_box 3.4e-12 148-209
264-313
HMMSmart SM00398 high 1.3e-10 147-217
263-328
ProfileScan PS50118 HMG_BOX_2 13.771 148-216
264-313
superfamily SSF47095 HMG-box 2.4e-15 140-214
248-316
no_ID  
Coil coil coiled-coil NA 55-118
HMMPanther PTHR13711 SWI/SNF-RELATED 8.1e-52 154-316
HMMPanther PTHR13711:SF39 SUBFAMILY 8.1e-52 154-316
Seg seg seg NA 74-84
88-119
130-142
245-267
Wolf-PSORT
Lj4g3v3002670.1	cyto 7, nucl 5, plas 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3002670.1