Miyakogusa Predicted Gene
- Lj4g3v3002660.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K6B0_SOYBN |
588 |
72.4 |
84.8 |
(tr|I1K6B0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G11090.1 |
444 |
57.2 |
75.2 |
| Symbols: TBL23 | TRICHOME BIREFRINGENCE-LIKE 23 | chr4:6764645-6766221 REVERSE LENGTH=432 |
| Medicago |
Medtr8g099300.1 |
567 |
68.4 |
76.9 |
| trichome birefringence-like protein | HC | chr8:41815583-41818776 | 20130731 |
| Soybean |
Glyma05g37030.1 |
588 |
72.4 |
84.8 |
|
| LJGI |
gnl|LJGI|TC72846 |
2004 |
99.0 |
99.0 |
similar to UniRef100_A7QNA5 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3002660.1 |
length: 410 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
3.2e-21 |
93-145 |
| IPR026057 |
PC-Esterase |
| HMMPfam |
PF13839 |
PC-Esterase |
1.9e-47 |
146-406 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
344-365 |
| HMMPanther |
PTHR32285 |
FAMILY |
1.7e-131 |
80-408 |
| HMMPanther |
PTHR32285:SF0 |
SUBFAMILY |
1.7e-131 |
80-408 |
| Seg |
seg |
seg |
NA |
11-31 |
- Wolf-PSORT
Lj4g3v3002660.1 cyto 4, chlo 3, cyto_plas 3, mito 2, plas 2, cyto_nucl 2, cyto_pero 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3002660.1 |
|