Miyakogusa Predicted Gene

Lj4g3v3002320.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KRZ6_SOYBN 1014 77.7 82.4 (tr|K7KRZ6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G64140.1 692 59.8 69.6 | Symbols: | BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). | chr1:23804069-23806009 REVERSE LENGTH=646

Medicago Medtr8g099105.1 974 75.1 80.4 | transcription factor, putative | HC | chr8:41634672-41630776 | 20130731

Soybean Glyma05g37240.1 1014 77.7 82.4

LJGI gnl|LJGI|TC80929 1360 100.0 100.0 homologue to UniRef100_A7QNF6 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v3002320.1 length: 665 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31827 FAMILY 9.8e-214 2-655

Seg seg seg NA 75-99
253-261
634-647

Wolf-PSORT

Lj4g3v3002320.1 nucl 11, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v3002320.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KRZ6_SOYBN	1014	77.7	82.4	(tr\|K7KRZ6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G64140.1	692	59.8	69.6	\| Symbols: \| BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). \| chr1:23804069-23806009 REVERSE LENGTH=646
Medicago	Medtr8g099105.1	974	75.1	80.4	\| transcription factor, putative \| HC \| chr8:41634672-41630776 \| 20130731
Soybean	Glyma05g37240.1	1014	77.7	82.4
LJGI	gnl\|LJGI\|TC80929	1360	100.0	100.0	homologue to UniRef100_A7QNF6 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)

no_ID
Lj4g3v3002320.1				length: 665 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31827	FAMILY	9.8e-214	2-655
Seg	seg	seg	NA	75-99 253-261 634-647