Miyakogusa Predicted Gene

Lj4g3v2989010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SW87_LOTJA 447 90.0 90.0 (tr|I3SW87) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G61490.3 332 68.7 84.6 | Symbols: | Pectin lyase-like superfamily protein | chr3:22758439-22760137 FORWARD LENGTH=476
Medicago Medtr8g098840.1 384 81.7 90.2 | polygalacturonase/glycoside hydrolase family protein | HC | chr8:41331762-41334923 | 20130731
Soybean Glyma05g37490.1 394 81.1 90.3  
LJGI gnl|LJGI|TC65908 1298 99.6 99.6 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2989010.1 length: 241 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 3.7e-16 139-239
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 4.7e-56 23-239
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.1e-63 40-240
no_ID  
HMMPanther PTHR31339 FAMILY 1e-100 1-241
HMMPanther PTHR31339:SF0 SUBFAMILY 1e-100 1-241
Seg seg seg NA 3-14
45-56
Wolf-PSORT
Lj4g3v2989010.1	E.R. 3.5, E.R._plas 3.5, plas 2.5, nucl 2, cyto 2, cyto_nucl 2, mito 1, extr 1, vacu 1, cysk 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2989010.1