Miyakogusa Predicted Gene
- Lj4g3v2916520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SSU7_LOTJA |
736 |
99.4 |
99.4 |
(tr|I3SSU7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G12780.1 |
630 |
85.3 |
90.8 |
| Symbols: UGE1, ATUGE1 | UDP-D-glucose/UDP-D-galactose 4-epimerase 1 | chr1:4356124-4358120 REVERSE LENGTH=351 |
| Medicago |
Medtr8g096880.1 |
659 |
89.2 |
93.2 |
| UDP-D-glucose/UDP-D-galactose 4-epimerase | HC | chr8:40665301-40661809 | 20130731 |
| Soybean |
Glyma05g38120.1 |
672 |
91.2 |
94.1 |
|
| LJGI |
gnl|LJGI|TC60465 |
2089 |
99.8 |
99.8 |
homologue to UniRef100_Q43070 Cluster: UDP-glucose 4-epimerase; n=1; Pisum sativum|Rep: UDP-glucose 4-epimerase - Pisum sativum (Garden pea), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2916520.1 |
length: 353 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
5.1e-49 |
11-268 |
| IPR005886 |
UDP-glucose 4-epimerase GalE |
| Molecular Function |
GO:0003978 |
UDP-glucose 4-epimerase activity |
|
|
| Biological Process |
GO:0006012 |
galactose metabolic process |
|
|
| HMMPanther |
PTHR10366:SF39 |
UDP-GLUCOSE |
5.7e-202 |
4-352 |
| HMMTigr |
TIGR01179 |
galE: |
6.2e-129 |
10-346 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
7.1e-52 |
6-190 |
| IPR025308 |
UDP-glucose 4-epimerase C-terminal domain |
| HMMPfam |
PF13950 |
Epimerase_Csub |
2.3e-27 |
288-349 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.25.10 |
no description |
5.1e-52 |
276-350 |
| HMMPanther |
PTHR10366 |
NAD |
5.7e-202 |
4-352 |
| superfamily |
SSF51735 |
NAD(P)-binding |
9.4e-96 |
1-351 |
- Wolf-PSORT
Lj4g3v2916520.1 chlo 6, cyto 4, extr 2, cyto_nucl 2, cyto_pero 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2916520.1 |
Not targeted |
-21.971 |
0 |
0 |
15.76% |
-21.971
|