Miyakogusa Predicted Gene

Lj4g3v2916480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LNN3_SOYBN 1240 71.2 81.1 (tr|I1LNN3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G09040.1 869 51.2 69.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Medicago Medtr4g032895.1 1181 73.0 83.4 | pentatricopeptide (PPR) repeat protein | HC | chr4:11375774-11372564 | 20130731
Soybean Glyma12g00310.1 1241 71.2 81.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2916480.1 length: 822 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0068 163-186
264-289
292-319
365-390
568-590
HMMPfam PF13041 PPR_2 2.6e-12 88-132
188-236
495-540
594-642
HMMTigr TIGR00756 PPR: 1.1e-07 63-90
92-121
191-225
292-326
495-528
597-630
ProfileScan PS51375 PPR 7.794 88-122
57-87
189-223
158-188
123-157
290-324
259-289
224-258
360-394
325-359
493-527
595-629
563-593
528-562
630-665
666-696
732-766
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.5e-12 695-758
no_ID  
HMMPanther PTHR24015 FAMILY 8.4e-253 42-811
HMMPanther PTHR24015:SF43 PENTATRICOPEPTIDE 8.4e-253 42-811
Seg seg seg NA 122-140
superfamily SSF48452 TPR-like 0.00035 568-757
62-316
Wolf-PSORT
Lj4g3v2916480.1	chlo 4, vacu 3, nucl 2, plas 2, nucl_plas 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2916480.1